The following tools have been installed/updated on Galaxy Australia
Assembly
- busco was updated to 1e62c28ba91d
Blast +
- ncbi_blast_plus was updated to 2889433c7ae1
ChemicalToolBox
- openbabel_compound_convert was updated to b59c91adeac1
- rdock_rbcavity was updated to 2f218be61685
- rdock_rbdock was updated to e4b7d1507a75
- sucos_max_score was updated to d4c67ced6abc
DeepTools
- deeptools_correct_gc_bias was updated to 2c37ce318bc3
- deeptools_plot_heatmap was updated to a4dfb122e52b
FASTA/FASTQ
- umi_tools_extract revision d5ff68d2d5ff was installed
- umi_tools_count revision 276b4111b253 was installed
Gemini Tools
- gemini_inheritance revision 18d13111692b was installed
- gemini_fusions was updated to 8151a5a0e4f6
- gemini_interactions was updated to 2550239feed5
- gemini_pathways was updated to 9199331c3421
Metagenomic Analysis
- kraken_report was updated to 1902d3de4a4f
Proteomics
- maxquant revision 7f432d87c82c was installed
RNA-seq
- featurecounts was updated to a37612abf7f9
- gffcompare was updated to 0f710191a66d
SAM/BAM
- bamtools_filter revision cb20f99fd45b was installed
Single-cell
- anndata_import revision 32e547223c9e was installed
- anndata_inspect revision b9fac48532eb was installed
- anndata_manipulate revision d4af736e7b83 was installed
- raceid_inspectclusters revision 37a47c4fd84d was installed
- raceid_inspecttrajectory revision 69018f285aa3 was installed
- scater_filter revision b7ea9f09c02f was installed
- scater_plot_dist_scatter revision 2e41b35b5bdd was installed
- scater_plot_pca revision 46fc6751d746 was installed
- raceid_clustering revision 7e014059a88d was installed
- raceid_filtnormconf revision 7608d5faee41 was installed
- scanpy_cluster_reduce_dimension revision 77b91b9bdf52 was installed
- scanpy_normalize revision 3bcd5445cd7a was installed
- raceid_trajectory revision 44b935f2271b was installed
- scanpy_filter revision a97abb8cd15b was installed
- scanpy_remove_confounders revision f2f6c703da06 was installed
- scater_create_qcmetric_ready_sce revision fd808de478b1 was installed
- scanpy_inspect revision 5e9171dc8244 was installed
- scanpy_plot revision dbbe1ea8ecb1 was installed
VCF/BCF
- bcftools_csq was updated to f10f5b4e7854
- bcftools_mpileup was updated to f65383c7ed49
- bcftools_norm was updated to a62e934346f5
Variant Calling
- lofreq_call was updated to 3b4b2121842f
